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Table 4 Models after refinement using Galaxyrefine server

From: Putative new combination vaccine candidates identified by reverse vaccinology and genomic approaches to control enteric pathogens

Model

GDT-HA

RMSD

MolProbity

Clash score

Poor

rotamers

Rama favored

Initial

1.0000

0.000

1.099

3.1

0.0

100.0

MODEL 1

0.9512

0.450

1.465

3.0

3.1

100.0

MODEL 2

0.9634

0.440

1.266

1.5

3.1

100.0

MODEL 3

0.9390

0.422

1.089

3.0

0.0

100.0

MODEL 4

0.9512

0.439

1.465

3.0

3.1

100.0

MODEL 5

0.9329

0.456

0.890

1.5

0.0

100.0

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BMC Immunology

ISSN: 1471-2172

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